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GENOME ANALYSIS
Genome resequencing is a widely applied tool to discover events of single nucleotide polymorphism (SNP), insertion deletion (InDel), structure variation (SV), and copy number variation (CNV) in species with known reference genomes. With Funomics’ genome resequencing solution, researchers can quickly obtain these information to discover species evolution, guide molecular breeding, or identify biomarkers for diseases diagnosis and treament.
Fun Genome
Technical Workflow
Bioinformatics Analysis
1. Sequencing data statistics
2. Reads mapping to reference genome
3. SNP, InDel, SV and CNV detection with GATK
4. SV deep analysis with vcfutils
5. SV annotation with Annovar
Sample Requirements
Quantity: ≥ 5 µg gDNA
Quality: OD260/OD280 = 1.8-2.0; No degradations;
No contamination.
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